Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948933.1_cds_XP_016490024.1_80488
CDS Infomation

[gene=LOC107809845] [db_xref=GeneID:107809845] [protein=vacuolar-processing enzyme-like] [protein_id=XP_016490024.1] [location=join(3826..3990,7727..7891,7979..8135,8342..8427,8519..8742,9047..9095,9257..9472,9564..9770,9889..10026)] [gbkey=CDS]
Sequence

ATGATATTTAGGTGTAATGTTAGTGTCATCTTTCTTGTTTTGCTCTCAATTTGGGTTATT
ATTGAAGGTCGTAGTATCTCTCAATTCTTGACCGAAGAATCGGAAGGAACCATATGGGCT
GTCTTAGTTGCTGGCTCTAATGGCTGGGAAAATTATAGGCATCAGGCTGATGTATGTCAC
GCTTACCAATTACTAAAGGATGGAGGTCTAAAAGATGAAAACATCATCGTATTCATGTAC
GATGATATTGCTAATAATAGGGAGAACCCCAGACCTGGAGTCATTATCAATAACCCACAT
GGCCATGATGTTTACAAAGGTGTCCCCAAGGATTATGTGCTTGAAGATGTTAATGCTAAC
AACTTTTACAATGTTATCCTTGGAAACAAAAGCGCTGTAGTTGGGGGCAGTGGGAAAGTA
GTGAACAGTGGTCCAAATGACCATATCTTCATCTATTATACTGATCATGGTGGCCCTGGT
GTGGTTTCGATGCCAAGTGGAGAAGATGTTTACGCTAATGATCTGATTGATATGTTGAAA
AAGAAGCATGCTTCAGGGACATATGACAGACTGGTGTTTTACTTAGAAGCTTGTGAGTCC
GGAAGCATGTTTGATGGTCTTCTTCCTGAAGGTCTAGACATATATGTCATGACTGCATCA
GAACCTAATGAAGATAGTTGGGCGACGTATTGTGGTGAGGGTACTCCTGATGATCCCTGC
TTGGTTGAGTGTCCCCTTCCCGAGTTTCAGGGTGTGTGCTTGGGAGATTTGTACAGTGTT
GCTTGGATGGAAGATAGCGATGTAACAGATCGAGATGCTGACAGTGTGCAAGGGCAGCAT
AGCCGAGTTGCAAATAGAACTGCAACCAACATAGCATTTGGTGGCTATGGCTCCCATGTC
ACAGAATACGGTGATATAGTGGTGAGCTTTGATCGACTTTCCACATATATGGGTGAAGCT
TCCACAAACCACAGTCATGCCTCTGTGAATGCCATGTCATTCTCGACATCATCAAAGAGT
GTGGATCAGCGCAGTGCTGAACTTTTCTATTTGTTCACCAAACACCAAAATGCCCCTGAA
GGCTCTGATGAGAAATTCAAAGCTCATGCGAGACTTACTGAAGCTATATCACAGAGAACT
CAAGTGGACAACAATGTAAAACATCTTGGGGAGCTTCTTTTTGGTGTTGAAAAAGGTAAT
GAGATACTACACAGTGTTCGACCTGCTGGACAACCACTTGTTGACAGCTGGGATTGCCTT
AAGTCCTACGTCAAGATATTTGAGGCACATTGTGGAAGATTAACCTCGTATGGAAAGAAA
CACATACGTGGTATAGCCAACATCTGCAACGCTGGAATTGCGAGTGAACAAATGGCTGCT
ACATCTGCACAAGCATGTTCAAGTTAG

Peptide Sequence

PEP ID

XP_016490024.1
PEP Infomation

PREDICTED: vacuolar-processing enzyme-like [Nicotiana tabacum]
Sequence

MIFRCNVSVIFLVLLSIWVIIEGRSISQFLTEESEGTIWAVLVAGSNGWENYRHQADVCH
AYQLLKDGGLKDENIIVFMYDDIANNRENPRPGVIINNPHGHDVYKGVPKDYVLEDVNAN
NFYNVILGNKSAVVGGSGKVVNSGPNDHIFIYYTDHGGPGVVSMPSGEDVYANDLIDMLK
KKHASGTYDRLVFYLEACESGSMFDGLLPEGLDIYVMTASEPNEDSWATYCGEGTPDDPC
LVECPLPEFQGVCLGDLYSVAWMEDSDVTDRDADSVQGQHSRVANRTATNIAFGGYGSHV
TEYGDIVVSFDRLSTYMGEASTNHSHASVNAMSFSTSSKSVDQRSAELFYLFTKHQNAPE
GSDEKFKAHARLTEAISQRTQVDNNVKHLGELLFGVEKGNEILHSVRPAGQPLVDSWDCL
KSYVKIFEAHCGRLTSYGKKHIRGIANICNAGIASEQMAATSAQACSS

Transcript Sequence

Gene sequence data has not been registered.